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Oratai Thakom. Genome-wide Identification and bioinformatic analysis of the NAC transcription factors from Mungbean (vigna radiata). Master's Degree(Genetics). Kasetsart University. Office of the University Library. : Kasetsart University, 2022.
Genome-wide Identification and bioinformatic analysis of the NAC transcription factors from Mungbean (vigna radiata)
Name: Oratai Thakom
Classification :.LCCS: QK495.L52
LCSH:
Bioinformatics
LCSH:
Genomes
LCSH:
Transcription factors
Abstract:
Plant-specific NAC (NAM, ATAF1/2, and CUC2) transcription factors play an important role in regulating plant growth, development, and stress resistance. Therefore, they are potential candidates for the genetic engineering of stress-tolerant crops. Mungbean is a major grain legume cultivated in Asia. This study identified 82 mungbean NAC transcription factors (VrNACs) based on the available genomic data. VrNACs were named according to their chromosomal locations. The phylogeny of VrNAC proteins was analyzed using the neighborjoining method. The VrNACs were clustered into 13 subfamilies. Physicochemical properties and divergence in the amino-acid composition of VrNACs were analyzed. Gene structure and conserved motif analysis within the same subfamily further support the phylogenetic tree's accuracy and indicate the functional diversity of the VrNAC gene family. Evolutionary study of VrNAC genes suggests that gene duplication is a major expansion route for this family. Promoter analysis showed that the VrNAC genes might play roles in various stress responses. To predict the function of VrNACs, orthologs between mungbean, soybean, and Arabidopsis NACs were identified. In addition, protein-protein interaction analysis suggests that VrNACs may interact with other proteins to enable their biological function. These results will be helpful for further research on laying the foundation and study of the functional characteristics of VrNAC genes in the future.
Kasetsart University. Office of the University Library
Address:
Bangkok
Email:
tdckulib@ku.ac.th
Name: Piyada Juntawong
Role:
Thesis Advisor
Created:
2022
Modified:
2025-07-24
Issued:
2025-07-24
วิทยานิพนธ์/Thesis
application/pdf
URL: https://www.lib.ku.ac.th/KUthesis/2565/oratai-tha-all.pdf
CallNumber:
QK495.L52 .O73
eng
DegreeName: Master of Science
Level: Master's Degree
Descipline: Genetics
Grantor: Kasetsart University
©copyrights Kasetsart University
RightsAccess:
ใช้เวลา
0.026869 วินาที
Oratai Thakom
| Title | Contributor | Type |
|---|---|---|
| Genome-wide Identification and bioinformatic analysis of the NAC transcription factors from Mungbean (vigna radiata)
มหาวิทยาลัยเกษตรศาสตร์ Oratai Thakom | Piyada Juntawong | วิทยานิพนธ์/Thesis |
Piyada Juntawong
| Title | Creator | Type and Date Create |
|---|---|---|
| Genome-wide Identification and bioinformatic analysis of the NAC transcription factors from Mungbean (vigna radiata)
มหาวิทยาลัยเกษตรศาสตร์ Piyada Juntawong | Oratai Thakom | วิทยานิพนธ์/Thesis |
| Genome-wide association study reveals genomic regions controlling tolerance to iron toxicity at seedling stage in Thai rice varieties
มหาวิทยาลัยเกษตรศาสตร์ Piyada Juntawong | Reunreudee Kaewcheenchai | วิทยานิพนธ์/Thesis |
| Identification of molecular mechanism controlling waterlogging tolerance and functional characterization of stress-regulated transcription factor genes in Vigna radiata
มหาวิทยาลัยเกษตรศาสตร์ Piyada Juntawong | Pimprapai Butsayawarapat | วิทยานิพนธ์/Thesis |
| Elucidation of the molecular mechanism involved in the biosynthesis of Piperine and Piperamide from Piper retrofractum fruit by transcriptome
มหาวิทยาลัยเกษตรศาสตร์ Piyada Juntawong;Peerapat Roongsattham | Methat Meechuen | วิทยานิพนธ์/Thesis |